Browsing by Author "Abugessaisa I."

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  • An integrated expression atlas of miRNAs and their promoters in human and mouse 
    De Rie D.; Abugessaisa I.; Alam T.; Arner E.; Arner P.; Ashoor H.; Åström G.; Babina M.; Bertin N.; Burroughs A.; Carlisle A.; Daub C.; Detmar M.; Deviatiiarov R.; Fort A.; Gebhard C.; Goldowitz D.; Guhl S.; Ha T.; Harshbarger J.; Hasegawa A.; Hashimoto K.; Herlyn M.; Heutink P.; Hitchens K.; Hon C.; Huang E.; Ishizu Y.; Kai C.; Kasukawa T.; Klinken P.; Lassmann T.; Lecellier C.; Lee W.; Lizio M.; Makeev V.; Mathelier A.; Medvedeva Y.; Mejhert N.; Mungall C.; Noma S.; Ohshima M.; Okada-Hatakeyama M.; Persson H.; Rizzu P.; Roudnicky F.; Sætrom P.; Sato H.; Severin J.; Shin J.; Swoboda R.; Tarui H.; Toyoda H.; Vitting-Seerup K.; Winteringham L.; Yamaguchi Y.; Yasuzawa K.; Yoneda M.; Yumoto N.; Zabierowski S.; Zhang P.; Wells C.; Summers K.; Kawaji H.; Sandelin A.; Rehli M.; Hayashizaki Y. (2017)
    © 2017 Nature America, Inc., part of Springer Nature. MicroRNAs (miRNAs) are short non-coding RNAs with key roles in cellular regulation. As part of the fifth edition of the Functional Annotation of Mammalian Genome (FANTOM5) ...
  • Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network 
    Grapotte M.; Saraswat M.; Bessière C.; Menichelli C.; Ramilowski J.A.; Severin J.; Hayashizaki Y.; Itoh M.; Tagami M.; Murata M.; Kojima-Ishiyama M.; Noma S.; Noguchi S.; Kasukawa T.; Hasegawa A.; Suzuki H.; Nishiyori-Sueki H.; Frith M.C.; Abugessaisa I.; Aitken S.; Aken B.L.; Alam I.; Alam T.; Alasiri R.; Alhendi A.M.N.; Alinejad-Rokny H.; Alvarez M.J.; Andersson R.; Arakawa T.; Araki M.; Arbel T.; Archer J.; Archibald A.L.; Arner E.; Arner P.; Asai K.; Ashoor H.; Astrom G.; Babina M.; Baillie J.K.; Bajic V.B.; Bajpai A.; Baker S.; Baldarelli R.M.; Balic A.; Bansal M.; Batagov A.O.; Batzoglou S.; Beckhouse A.G.; Beltrami A.P.; Beltrami C.A.; Bertin N.; Bhattacharya S.; Bickel P.J.; Blake J.A.; Blanchette M.; Bodega B.; Bonetti A.; Bono H.; Bornholdt J.; Bttcher M.; Bougouffa S.; Boyd M.; Breda J.; Brombacher F.; Brown J.B.; Bult C.J.; Burroughs A.M.; Burt D.W.; Busch A.; Caglio G.; Califano A.; Cameron C.J.; Cannistraci C.V.; Carbone A.; Carlisle A.J.; Carninci P.; Carter K.W.; Cesselli D.; Chang J.C.; Chen J.C.; Chen Y.; Chierici M.; Christodoulou J.; Ciani Y.; Clark E.L.; Coskun M.; Dalby M.; Dalla E.; Daub C.O.; Davis C.A.; de Hoon M.J.L.; de Rie D.; Denisenko E.; Deplancke B.; Detmar M.; Deviatiiarov R.; Di Bernardo D.; Diehl A.D.; Dieterich L.C. (2021)
    Using the Cap Analysis of Gene Expression (CAGE) technology, the FANTOM5 consortium provided one of the most comprehensive maps of transcription start sites (TSSs) in several species. Strikingly, ~72% of them could not be ...

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